CDS

Accession Number TCMCG056C04493
gbkey CDS
Protein Id XP_031398448.1
Location join(51690854..51692915,51693193..51694009,51694292..51694582,51694679..51694880)
Gene LOC116209012
GeneID 116209012
Organism Punica granatum

Protein

Length 1123aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA580467
db_source XM_031542588.1
Definition phytochrome A1 [Punica granatum]

EGGNOG-MAPPER Annotation

COG_category K
Description Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
KEGG_ko ko:K12120        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04712        [VIEW IN KEGG]
map04712        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004672        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006468        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007602        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009581        [VIEW IN EMBL-EBI]
GO:0009582        [VIEW IN EMBL-EBI]
GO:0009583        [VIEW IN EMBL-EBI]
GO:0009585        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009606        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009629        [VIEW IN EMBL-EBI]
GO:0009630        [VIEW IN EMBL-EBI]
GO:0009637        [VIEW IN EMBL-EBI]
GO:0009638        [VIEW IN EMBL-EBI]
GO:0009639        [VIEW IN EMBL-EBI]
GO:0009640        [VIEW IN EMBL-EBI]
GO:0009642        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009881        [VIEW IN EMBL-EBI]
GO:0009883        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010017        [VIEW IN EMBL-EBI]
GO:0010018        [VIEW IN EMBL-EBI]
GO:0010114        [VIEW IN EMBL-EBI]
GO:0010161        [VIEW IN EMBL-EBI]
GO:0010201        [VIEW IN EMBL-EBI]
GO:0010203        [VIEW IN EMBL-EBI]
GO:0010218        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016301        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016773        [VIEW IN EMBL-EBI]
GO:0017148        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031516        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032269        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0034249        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0038023        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046685        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051248        [VIEW IN EMBL-EBI]
GO:0051606        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055122        [VIEW IN EMBL-EBI]
GO:0060089        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071482        [VIEW IN EMBL-EBI]
GO:0071489        [VIEW IN EMBL-EBI]
GO:0071490        [VIEW IN EMBL-EBI]
GO:0071491        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTTCCTCGAGGCCAAGCCAGTCATCAAACAACTCGAACAGGTCAAGACACAGCGCGAGGATCATCGCACAGACTACAGTAGACGCAAAACTCCATCAGGACTTTGAGGAGTCAGGAAGCTCCTTTGACTACTCAAGCTCGGTTCGGGTCTCCAGTGCCTCGAATGTGGACGCACAGCCGAGATCCGACAGAGTGACCACTGCCTACCTCCACCATATACAAAAGGGCAAGCTGATTCAGCCTTTCGGTTGCTTGTTAGCTCTAGATGAGAAGACCTTTAAGGTTATTGCCTACACTGAGAATGCTCCCGAGATGCTTACAATGGTGAGTCACGCAGTCCCCAGTGTCGGTGACTGCCCAGCCCTTGGGATTGGAACCGATGTTAGGGCTATATTTACCGTGCCCAGTGCCTCTGCCCTTCATAAGGCTCTTGGGTTCGCAGATGTTTCTCTACTGAATCCCATCTTAGTTCATTGCAAGACCTCGGGAAAGCCCTTTTATGCAATTGTCCATCGGGTAACTGGGAGCTTGATTGTGGACTTTGAGCCTGTGAAGCCTTATGAAATCCCAATGACTGCTGCTGGGGCTTTGCAGTCCTATAAACTTGCAGCAAAGGCTATTGCTCGACTTCAGTCTTTGCCTAGTGGAAGCATGGAGAGGCTTTGCGACACGATGGTTCAAGAGGTCTTTGAACTCACAGGTTATGACCGGGTTATGACCTACAAATTTCATGATGATGATCACGGCGAGGTCATTGCTGAGGTTACTAAACCAGGTCTTGAGCCTTACTTGGGCCTGCATTACCCTGCCACAGACATCCCACAAGCAGCACGTTTCTTGTTCATGAAGAACAGGGTCCGAATGATCGTGGACTGTCGTGCAAAACATGTGAAGGTCCTTCAGGATGAGAAGCTTTCTTTCGATCTGACTCTGTGCGGGTCCACCCTCAGGGCCCCGCACAGCTGCCATCTACAGTACATGGAGAACATGAACTCCATAGCTTCTCTTGTGATGGCGGTGGTGATTAATGAAGGGAATGAGGAACCCGAGAGCAGCAACTCTTCTGAGGCGGGCTTGCAGAAGAGGAAGAGGCTCTGGGGCTTAGTGGTCTGCCACAACACGACTCCAAGATTCGTCCCCTTCCCTCTTCGATATGCTTGCGAGTTTCTTGCTCAAGTATTCGCCATCCACGTGAACAAAGAGCTTGAGTTAGAGAATCAGATAGTGGAGAAAAATATCTTGAGGACGCAAACTCTATTATGTGATATGTTGATGAGAGATGCTCCGCTGGGGATCATGTCCCAGAACCCGAATATAATGGACCTTGTTAAGTGTGATGGAGCTGCTTTACTCTACAACAACAAGATACATAAGCTGGGATTGACTCCCACTGACTTTCAGCTACGAGACATAGCCTCATGGCTCGGTGAGTACCACATGGATTCCACGGGTCTAAGCACCGATAGCTTATATGATGCTGGGTTTCCGGGTGCTTTAGCTCTAGGGGATGCAGTCTGTGGAATGGCTGCTGTGAGGATTTCAGAAAAGGATATGATCTTCTGGTTCCGGTCTCACACAGCCTCGGAGATCCGATGGGGTGGAGCAAAGCACGATCCTGGTGAGAAGGACGATAACCGGAGAATGCACCCGAGGTCATCTTTTAAGGCATTTCTTGATGTCGTTAAGACAAGAAGTCTTTCTTGGAAAGACTATGAGATGGACGCAATCCATTCCTTGCAGCTTATCTTGAGGAACACAATCAAGGACATGGATGCGATTGAGGTCAATACCACAGCCATCCACACGAGGCTCAATGATCTTAAGATTGATGGGTTGCAGGAACTGGAAGCTGTCACGACTGAGATGGTGCGATTAATTGAGACTGCTACTGTGCCTGTCTTGGCGGTTGATGTGAATGGGCATATAAACGGATGGAATTCAAAGGTTGCTGAGCTAACAGGACTTCCAGTTGAGAGAGCCATTGGGAAGCACCTTCTCACGCTTGTTGAGGATTCTTCGGCTGATGTGATGGAAAAGATGTTGTCCTTAGCATTACAAGGCAAAGAGGAGCGGAACATCCAATTCGAGATTAAAACGCATGGAACCAGTGCAGATGAGGGTCCTATACGCTTAATTGCGAATGCCTGTGCGAGTCGGGACCTTCAAGAAAACGTTGTGGGAGTGTGCTTCGTGGCCCAAGATATCACTGCCCAGAAAACTGTCATGGACAAGTTCACTCAAATTGAAGGAGATTACAAGGCGATTGTCCATAACCCGAACCCCCTGATCCCTCCTATCTTTGGCACAGATGAATTTGGGTGGTGTTCTGAGTGGAACACTGCAATGGCAAACCTCACTGGATGGAACCGTGAGGACGTGATAGACAAGATGCTCCTAGGGGAGGTCTTTGGGATCCAGTCGGCATGCTGTCGTCTCAAGAACCAGGAAGCATTCGTGAGTCTTGGGGTAGTTCTCAACAATGCAATAGCCGGTCAGGAATCTGAGAAGGTTTCATTTGGTTTCCTTTCTAGGACCGGAAAGTACGTCGAATGCCTCTTGTGCGTGAGTAAGAAGCTCGATCGGGAGGGCGCGGTCACCGGGGTCTTTTGCTTCTTGCAGCTCGCAAGTCCTGAGCTGCAACAAGCAATTCACGTTCAGCGATTATCAGAGCAAACTGCATTGAAGAGATTGAAAGCATTGGCTTACATAAAGAGGCAGGTAAGCAATCCACTCTCCGGGATTATGTTTTCCGTGAAAATGCTTGAAGGAACCAATCTTGGAGCTGAACAGAAGCAGCTCCTCCAAACTAGCGGACAGTGCCAGCGCCAGCTCAACAGGGTCCTTGATGATTCTGACCTCGATAGCATCATTGATGGATACTTGGAGCTGGAAATGGTCAAGTTCACTCTGCACCAAGTAGTAGTTGCTTCTGTAAGTCAGGTCATGATGAAGAGCAGTGCGAAGGGCGTAAGGATTGTCCATGATGCAGCAGAAGATGTCATGAAGGAAACATTATATGGAGACAGCCTTAGGCTTCAACAAGTCTTAGCCGATTTCCTTTCAGTATCAATAAATTACACATCAAATGGAAGCGTCCTTCTTGTTACTGCTCAGTTGACTCGGGATCGTCTGGGTGAAACAGTCCATCTAGGAAGGCTGGAGCTGAGAATAACTCATGCTGGAGTGGGAGTACCCGAAGCTTTGCTGAACCAAATGTTCGGGAGCGATGGGGAGATATCCGAGGATGGAATAAGTCTGCTTATAAGCAGGAAACTCATAAAACTCATGAATGGAGATGTGCAGTATCTGAGGGAAGCTGGGAAGTCGAGCTTCATCATAACCGTCGAGCTTGCTGTAGCCCATAAATAG
Protein:  
MSSSRPSQSSNNSNRSRHSARIIAQTTVDAKLHQDFEESGSSFDYSSSVRVSSASNVDAQPRSDRVTTAYLHHIQKGKLIQPFGCLLALDEKTFKVIAYTENAPEMLTMVSHAVPSVGDCPALGIGTDVRAIFTVPSASALHKALGFADVSLLNPILVHCKTSGKPFYAIVHRVTGSLIVDFEPVKPYEIPMTAAGALQSYKLAAKAIARLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHDDDHGEVIAEVTKPGLEPYLGLHYPATDIPQAARFLFMKNRVRMIVDCRAKHVKVLQDEKLSFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVINEGNEEPESSNSSEAGLQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRDAPLGIMSQNPNIMDLVKCDGAALLYNNKIHKLGLTPTDFQLRDIASWLGEYHMDSTGLSTDSLYDAGFPGALALGDAVCGMAAVRISEKDMIFWFRSHTASEIRWGGAKHDPGEKDDNRRMHPRSSFKAFLDVVKTRSLSWKDYEMDAIHSLQLILRNTIKDMDAIEVNTTAIHTRLNDLKIDGLQELEAVTTEMVRLIETATVPVLAVDVNGHINGWNSKVAELTGLPVERAIGKHLLTLVEDSSADVMEKMLSLALQGKEERNIQFEIKTHGTSADEGPIRLIANACASRDLQENVVGVCFVAQDITAQKTVMDKFTQIEGDYKAIVHNPNPLIPPIFGTDEFGWCSEWNTAMANLTGWNREDVIDKMLLGEVFGIQSACCRLKNQEAFVSLGVVLNNAIAGQESEKVSFGFLSRTGKYVECLLCVSKKLDREGAVTGVFCFLQLASPELQQAIHVQRLSEQTALKRLKALAYIKRQVSNPLSGIMFSVKMLEGTNLGAEQKQLLQTSGQCQRQLNRVLDDSDLDSIIDGYLELEMVKFTLHQVVVASVSQVMMKSSAKGVRIVHDAAEDVMKETLYGDSLRLQQVLADFLSVSINYTSNGSVLLVTAQLTRDRLGETVHLGRLELRITHAGVGVPEALLNQMFGSDGEISEDGISLLISRKLIKLMNGDVQYLREAGKSSFIITVELAVAHK